Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLE3Q9NRF9 AC133561.5-201ENST00000635547 218 ntBASIC16.77■□□□□ 0.28
POLE3Q9NRF9 GNAS-203ENST00000306120 1878 ntBASIC16.77■□□□□ 0.27
POLE3Q9NRF9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
POLE3Q9NRF9 AC099343.3-201ENST00000605834 2503 ntBASIC16.76■□□□□ 0.27
POLE3Q9NRF9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 BX664615.1-201ENST00000443558 458 ntBASIC16.76■□□□□ 0.27
POLE3Q9NRF9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 AC010203.1-204ENST00000548782 407 ntBASIC16.76■□□□□ 0.27
POLE3Q9NRF9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 AC068880.1-201ENST00000507289 2297 ntBASIC16.76■□□□□ 0.27
POLE3Q9NRF9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLE3Q9NRF9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AC022898.2-201ENST00000616822 1312 ntBASIC16.75■□□□□ 0.27
POLE3Q9NRF9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AL137013.1-201ENST00000432946 1228 ntBASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 RASA4DP-201ENST00000460726 1199 ntBASIC16.75■□□□□ 0.27
POLE3Q9NRF9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 AL023973.1-201ENST00000624619 620 ntBASIC16.75■□□□□ 0.27
POLE3Q9NRF9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLE3Q9NRF9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLE3Q9NRF9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms