Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 AC022898.2-201ENST00000616822 1312 ntBASIC20.1■□□□□ 0.81
VTA1Q9NP79 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 RNA5SP415-201ENST00000517246 115 ntBASIC20.1■□□□□ 0.81
VTA1Q9NP79 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 AD001527.2-201ENST00000622994 785 ntBASIC20.1■□□□□ 0.81
VTA1Q9NP79 AL022326.1-202ENST00000641533 845 ntBASIC20.1■□□□□ 0.81
VTA1Q9NP79 AC073592.3-201ENST00000625118 1834 ntBASIC20.1■□□□□ 0.81
VTA1Q9NP79 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.1■□□□□ 0.81
VTA1Q9NP79 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
VTA1Q9NP79 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 MIR1233-2-201ENST00000408138 82 ntBASIC20.09■□□□□ 0.81
VTA1Q9NP79 MIR1233-1-201ENST00000408722 82 ntBASIC20.09■□□□□ 0.81
VTA1Q9NP79 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 AL591424.1-201ENST00000442569 1213 ntBASIC20.09■□□□□ 0.81
VTA1Q9NP79 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 PGAM5P1-201ENST00000518923 814 ntBASIC20.09■□□□□ 0.81
VTA1Q9NP79 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 AC140113.2-201ENST00000604370 208 ntBASIC20.09■□□□□ 0.81
VTA1Q9NP79 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VTA1Q9NP79 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.09■□□□□ 0.81
VTA1Q9NP79 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 MED15P5-201ENST00000423150 992 ntBASIC20.08■□□□□ 0.81
VTA1Q9NP79 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 BX005266.1-201ENST00000473402 457 ntBASIC20.08■□□□□ 0.81
VTA1Q9NP79 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.08■□□□□ 0.81
VTA1Q9NP79 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VTA1Q9NP79 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
VTA1Q9NP79 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
VTA1Q9NP79 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.08■□□□□ 0.8
VTA1Q9NP79 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VTA1Q9NP79 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VTA1Q9NP79 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 AC103564.2-201ENST00000432853 1299 ntBASIC20.07■□□□□ 0.8
VTA1Q9NP79 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 SIGLEC16-201ENST00000599858 1437 ntBASIC20.07■□□□□ 0.8
VTA1Q9NP79 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VTA1Q9NP79 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTA1Q9NP79 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 AP002414.3-201ENST00000589352 1468 ntBASIC20.06■□□□□ 0.8
VTA1Q9NP79 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 PRYP5-201ENST00000451909 266 ntBASIC20.06■□□□□ 0.8
VTA1Q9NP79 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 AL356488.2-201ENST00000602755 427 ntBASIC20.06■□□□□ 0.8
VTA1Q9NP79 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms