Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 KRT18P41-201ENST00000518924 1277 ntBASIC20.95■□□□□ 0.94
EFCC1Q9HA90 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 OR7E14P-202ENST00000530490 1290 ntBASIC20.95■□□□□ 0.94
EFCC1Q9HA90 SART3-203ENST00000546611 1184 ntBASIC20.95■□□□□ 0.94
EFCC1Q9HA90 AC012640.2-201ENST00000561606 901 ntBASIC20.95■□□□□ 0.94
EFCC1Q9HA90 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 HTR5BP-201ENST00000430851 1154 ntBASIC20.94■□□□□ 0.94
EFCC1Q9HA90 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 AC002347.1-201ENST00000569543 541 ntBASIC20.94■□□□□ 0.94
EFCC1Q9HA90 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.94■□□□□ 0.94
EFCC1Q9HA90 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
EFCC1Q9HA90 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AC211486.1-202ENST00000416371 468 ntBASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AC211476.1-201ENST00000503899 468 ntBASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AC005336.2-201ENST00000593183 939 ntBASIC20.93■□□□□ 0.94
EFCC1Q9HA90 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 AC112777.1-201ENST00000540175 1423 ntBASIC20.93■□□□□ 0.94
EFCC1Q9HA90 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFCC1Q9HA90 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 METTL21AP1-201ENST00000438852 635 ntBASIC20.92■□□□□ 0.94
EFCC1Q9HA90 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 AP005117.1-201ENST00000584346 1413 ntBASIC20.92■□□□□ 0.94
EFCC1Q9HA90 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EFCC1Q9HA90 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms