Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NXF3Q9H4D5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
NXF3Q9H4D5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NXF3Q9H4D5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NXF3Q9H4D5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NXF3Q9H4D5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 AC007967.3-201ENST00000434308 558 ntBASIC19.41■□□□□ 0.7
NXF3Q9H4D5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NXF3Q9H4D5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 AC104581.1-202ENST00000635932 2618 ntBASIC19.4■□□□□ 0.7
NXF3Q9H4D5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 AP000347.1-202ENST00000435868 847 ntBASIC19.4■□□□□ 0.7
NXF3Q9H4D5 FAM197Y8-203ENST00000450145 560 ntBASIC19.4■□□□□ 0.7
NXF3Q9H4D5 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 AL662844.1-201ENST00000546340 181 ntBASIC19.4■□□□□ 0.7
NXF3Q9H4D5 AL355877.3-201ENST00000622820 899 ntBASIC19.4■□□□□ 0.7
NXF3Q9H4D5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NXF3Q9H4D5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NXF3Q9H4D5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 FGFR3P6-201ENST00000457012 610 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 AC079776.4-201ENST00000511039 504 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 DUTP2-201ENST00000519164 463 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 MTDHP3-201ENST00000594186 672 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 AC148477.8-201ENST00000624298 468 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 HLA-A-201ENST00000376802 1334 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 AC010460.3-201ENST00000511359 1579 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms