Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VPS11Q9H270 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS11Q9H270 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 ABHD17AP1-201ENST00000358206 933 ntBASIC18.16■□□□□ 0.5
VPS11Q9H270 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 KRT18P23-201ENST00000435622 1283 ntBASIC18.16■□□□□ 0.5
VPS11Q9H270 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 AL158047.1-201ENST00000445918 881 ntBASIC18.16■□□□□ 0.5
VPS11Q9H270 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
VPS11Q9H270 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.16■□□□□ 0.5
VPS11Q9H270 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VPS11Q9H270 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VPS11Q9H270 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VPS11Q9H270 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS11Q9H270 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VPS11Q9H270 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.15■□□□□ 0.5
VPS11Q9H270 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VPS11Q9H270 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 PRORSD1P-201ENST00000295112 541 ntBASIC18.15■□□□□ 0.5
VPS11Q9H270 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 AL355355.2-201ENST00000442321 338 ntBASIC18.15■□□□□ 0.5
VPS11Q9H270 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.15■□□□□ 0.5
VPS11Q9H270 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS11Q9H270 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
VPS11Q9H270 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VPS11Q9H270 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VPS11Q9H270 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS11Q9H270 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS11Q9H270 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS11Q9H270 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.14■□□□□ 0.5
VPS11Q9H270 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS11Q9H270 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS11Q9H270 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.14■□□□□ 0.49
VPS11Q9H270 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS11Q9H270 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS11Q9H270 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS11Q9H270 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.14■□□□□ 0.49
VPS11Q9H270 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 AP001412.1-201ENST00000608405 714 ntBASIC18.14■□□□□ 0.49
VPS11Q9H270 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VPS11Q9H270 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS11Q9H270 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS11Q9H270 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS11Q9H270 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS11Q9H270 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms