Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AC069236.1-201ENST00000604339 616 ntBASIC14.63□□□□□ -0.07
NKX6-2Q9C056 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-2Q9C056 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 KRT8P8-201ENST00000434750 1448 ntBASIC14.62□□□□□ -0.07
NKX6-2Q9C056 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.62□□□□□ -0.07
NKX6-2Q9C056 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 AC006116.8-202ENST00000587620 1550 ntBASIC14.62□□□□□ -0.07
NKX6-2Q9C056 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 AC008694.1-202ENST00000636953 945 ntBASIC14.62□□□□□ -0.07
NKX6-2Q9C056 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX6-2Q9C056 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX6-2Q9C056 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms