Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.82■■□□□ 1.4
ABCA3Q99758 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.82■■□□□ 1.4
ABCA3Q99758 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.82■■□□□ 1.4
ABCA3Q99758 AL390955.2-201ENST00000603032 514 ntBASIC23.82■■□□□ 1.4
ABCA3Q99758 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ABCA3Q99758 BCAR1-209ENST00000546196 1340 ntBASIC23.82■■□□□ 1.4
ABCA3Q99758 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ABCA3Q99758 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ABCA3Q99758 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.81■■□□□ 1.4
ABCA3Q99758 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.81■■□□□ 1.4
ABCA3Q99758 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
ABCA3Q99758 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
ABCA3Q99758 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
ABCA3Q99758 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
ABCA3Q99758 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ABCA3Q99758 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.81■■□□□ 1.4
ABCA3Q99758 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 AC103564.2-201ENST00000432853 1299 ntBASIC23.81■■□□□ 1.4
ABCA3Q99758 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.81■■□□□ 1.4
ABCA3Q99758 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ABCA3Q99758 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.8■■□□□ 1.4
ABCA3Q99758 AC093484.2-201ENST00000580996 2166 ntBASIC23.8■■□□□ 1.4
ABCA3Q99758 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
ABCA3Q99758 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ABCA3Q99758 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.8■■□□□ 1.4
ABCA3Q99758 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.8■■□□□ 1.4
ABCA3Q99758 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ABCA3Q99758 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ABCA3Q99758 Z92544.3-201ENST00000624747 417 ntBASIC23.8■■□□□ 1.4
ABCA3Q99758 ESPNP-201ENST00000270691 2015 ntBASIC23.8■■□□□ 1.4
ABCA3Q99758 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ABCA3Q99758 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ABCA3Q99758 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ABCA3Q99758 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.79■■□□□ 1.4
ABCA3Q99758 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.79■■□□□ 1.4
ABCA3Q99758 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 AC003669.1-201ENST00000334569 611 ntBASIC23.79■■□□□ 1.4
ABCA3Q99758 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ABCA3Q99758 ACTG1P14-201ENST00000446382 1122 ntBASIC23.79■■□□□ 1.4
ABCA3Q99758 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.79■■□□□ 1.4
ABCA3Q99758 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.79■■□□□ 1.4
ABCA3Q99758 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.79■■□□□ 1.4
ABCA3Q99758 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.79■■□□□ 1.4
ABCA3Q99758 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.78■■□□□ 1.4
ABCA3Q99758 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
ABCA3Q99758 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.78■■□□□ 1.4
ABCA3Q99758 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ABCA3Q99758 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
ABCA3Q99758 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ABCA3Q99758 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.78■■□□□ 1.4
ABCA3Q99758 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 AP002414.1-201ENST00000391405 1147 ntBASIC23.78■■□□□ 1.4
ABCA3Q99758 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
ABCA3Q99758 AC138761.1-201ENST00000584393 385 ntBASIC23.78■■□□□ 1.4
ABCA3Q99758 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ABCA3Q99758 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ABCA3Q99758 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.77■■□□□ 1.4
ABCA3Q99758 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms