Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 REXO1L9P-201ENST00000604264 2108 ntBASIC17.09■□□□□ 0.33
CHDHQ8NE62 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHDHQ8NE62 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHDHQ8NE62 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHDHQ8NE62 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHDHQ8NE62 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHDHQ8NE62 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHDHQ8NE62 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.08■□□□□ 0.33
CHDHQ8NE62 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHDHQ8NE62 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 LIN28AP1-201ENST00000429574 405 ntBASIC17.08■□□□□ 0.32
CHDHQ8NE62 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 LINC01238-205ENST00000567549 1107 ntBASIC17.08■□□□□ 0.32
CHDHQ8NE62 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.08■□□□□ 0.32
CHDHQ8NE62 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHDHQ8NE62 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 AD000864.1-201ENST00000624076 2295 ntBASIC17.07■□□□□ 0.32
CHDHQ8NE62 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHDHQ8NE62 TPM4P1-201ENST00000436100 807 ntBASIC17.07■□□□□ 0.32
CHDHQ8NE62 SLC25A3P1-201ENST00000443844 931 ntBASIC17.07■□□□□ 0.32
CHDHQ8NE62 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 AC104390.1-201ENST00000555663 520 ntBASIC17.07■□□□□ 0.32
CHDHQ8NE62 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
CHDHQ8NE62 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms