Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC004461.1-201ENST00000412461 403 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC051619.7-201ENST00000568314 623 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC004706.3-202ENST00000621574 984 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AL032819.2-201ENST00000624543 2162 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 TERF1P3-201ENST00000505638 1227 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC010654.1-201ENST00000615722 808 ntBASIC15.1■□□□□ 0.01
CSMD2Q7Z408 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD2Q7Z408 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AC008761.3-201ENST00000624803 892 ntBASIC15.09■□□□□ 0.01
CSMD2Q7Z408 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AC092902.6-201ENST00000641783 218 ntBASIC15.09■□□□□ 0.01
CSMD2Q7Z408 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AD001527.2-201ENST00000622994 785 ntBASIC15.09■□□□□ 0.01
CSMD2Q7Z408 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD2Q7Z408 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD2Q7Z408 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.08■□□□□ 0
CSMD2Q7Z408 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.08■□□□□ 0
CSMD2Q7Z408 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD2Q7Z408 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.08■□□□□ 0
CSMD2Q7Z408 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.08■□□□□ 0
CSMD2Q7Z408 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.08■□□□□ 0
CSMD2Q7Z408 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.08■□□□□ 0
CSMD2Q7Z408 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSMD2Q7Z408 AC073592.5-201ENST00000624854 528 ntBASIC15.08■□□□□ 0
CSMD2Q7Z408 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSMD2Q7Z408 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD2Q7Z408 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
CSMD2Q7Z408 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CSMD2Q7Z408 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.08■□□□□ 0
CSMD2Q7Z408 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms