Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
COL11A2P13942 AC019129.2-201ENST00000609837 1235 ntBASIC21.92■■□□□ 1.1
COL11A2P13942 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 MRPL20P1-201ENST00000400819 433 ntBASIC21.91■■□□□ 1.1
COL11A2P13942 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.91■■□□□ 1.1
COL11A2P13942 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
COL11A2P13942 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.91■■□□□ 1.1
COL11A2P13942 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.91■■□□□ 1.1
COL11A2P13942 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.91■■□□□ 1.1
COL11A2P13942 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
COL11A2P13942 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A2P13942 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.9■■□□□ 1.1
COL11A2P13942 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.9■■□□□ 1.1
COL11A2P13942 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.9■■□□□ 1.1
COL11A2P13942 AL020989.1-201ENST00000422979 469 ntBASIC21.9■■□□□ 1.1
COL11A2P13942 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.9■■□□□ 1.1
COL11A2P13942 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A2P13942 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.9■■□□□ 1.1
COL11A2P13942 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.9■■□□□ 1.1
COL11A2P13942 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
COL11A2P13942 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL11A2P13942 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.9■■□□□ 1.1
COL11A2P13942 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL11A2P13942 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
COL11A2P13942 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.89■■□□□ 1.1
COL11A2P13942 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.89■■□□□ 1.1
COL11A2P13942 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.89■■□□□ 1.1
COL11A2P13942 CEND1P1-201ENST00000451006 455 ntBASIC21.89■■□□□ 1.1
COL11A2P13942 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.89■■□□□ 1.1
COL11A2P13942 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.89■■□□□ 1.1
COL11A2P13942 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.89■■□□□ 1.1
COL11A2P13942 AC004790.2-201ENST00000623588 572 ntBASIC21.89■■□□□ 1.1
COL11A2P13942 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL11A2P13942 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
COL11A2P13942 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.89■■□□□ 1.09
COL11A2P13942 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
COL11A2P13942 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.89■■□□□ 1.09
COL11A2P13942 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A2P13942 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A2P13942 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A2P13942 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.89■■□□□ 1.09
COL11A2P13942 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A2P13942 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.89■■□□□ 1.09
COL11A2P13942 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.89■■□□□ 1.09
COL11A2P13942 AC093512.1-201ENST00000617969 520 ntBASIC21.89■■□□□ 1.09
COL11A2P13942 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL11A2P13942 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
COL11A2P13942 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.88■■□□□ 1.09
COL11A2P13942 MIR770-201ENST00000390219 98 ntBASIC21.88■■□□□ 1.09
COL11A2P13942 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 VN2R19P-201ENST00000442399 1052 ntBASIC21.88■■□□□ 1.09
COL11A2P13942 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.88■■□□□ 1.09
COL11A2P13942 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.88■■□□□ 1.09
COL11A2P13942 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.88■■□□□ 1.09
COL11A2P13942 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.88■■□□□ 1.09
COL11A2P13942 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.88■■□□□ 1.09
COL11A2P13942 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.88■■□□□ 1.09
COL11A2P13942 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.88■■□□□ 1.09
COL11A2P13942 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL11A2P13942 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms