Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.75■□□□□ 0.91
BMP3P12645 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BMP3P12645 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 AC087289.5-201ENST00000586076 3175 ntBASIC20.74■□□□□ 0.91
BMP3P12645 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 FAM220CP-201ENST00000395253 831 ntBASIC20.74■□□□□ 0.91
BMP3P12645 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BMP3P12645 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
BMP3P12645 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 AC096633.1-201ENST00000422446 749 ntBASIC20.74■□□□□ 0.91
BMP3P12645 ABCD1P5-201ENST00000445663 754 ntBASIC20.74■□□□□ 0.91
BMP3P12645 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.74■□□□□ 0.91
BMP3P12645 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.74■□□□□ 0.91
BMP3P12645 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.74■□□□□ 0.91
BMP3P12645 AP005117.1-201ENST00000584346 1413 ntBASIC20.74■□□□□ 0.91
BMP3P12645 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.74■□□□□ 0.91
BMP3P12645 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.74■□□□□ 0.91
BMP3P12645 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BMP3P12645 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BMP3P12645 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 AC135776.1-201ENST00000319817 2481 ntBASIC20.73■□□□□ 0.91
BMP3P12645 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.73■□□□□ 0.91
BMP3P12645 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.73■□□□□ 0.91
BMP3P12645 KRT18P67-201ENST00000432816 1264 ntBASIC20.73■□□□□ 0.91
BMP3P12645 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.73■□□□□ 0.91
BMP3P12645 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BMP3P12645 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.73■□□□□ 0.91
BMP3P12645 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.73■□□□□ 0.91
BMP3P12645 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BMP3P12645 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.73■□□□□ 0.91
BMP3P12645 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.72■□□□□ 0.91
BMP3P12645 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 AP000347.1-202ENST00000435868 847 ntBASIC20.72■□□□□ 0.91
BMP3P12645 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.72■□□□□ 0.91
BMP3P12645 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.72■□□□□ 0.91
BMP3P12645 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 AL773604.1-201ENST00000617417 272 ntBASIC20.72■□□□□ 0.91
BMP3P12645 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.72■□□□□ 0.91
BMP3P12645 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.72■□□□□ 0.91
BMP3P12645 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BMP3P12645 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
BMP3P12645 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP3P12645 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms