Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.66■□□□□ 0.42
SP9P0CG40 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.66■□□□□ 0.42
SP9P0CG40 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.65■□□□□ 0.42
SP9P0CG40 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.65■□□□□ 0.42
SP9P0CG40 AC022145.2-201ENST00000598203 171 ntBASIC17.65■□□□□ 0.42
SP9P0CG40 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.65■□□□□ 0.42
SP9P0CG40 AC023141.13-201ENST00000604991 943 ntBASIC17.65■□□□□ 0.42
SP9P0CG40 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 AL805961.1-202ENST00000641562 540 ntBASIC17.65■□□□□ 0.42
SP9P0CG40 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 LINC01006-201ENST00000333319 2292 ntBASIC17.65■□□□□ 0.42
SP9P0CG40 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
SP9P0CG40 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SP9P0CG40 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SP9P0CG40 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SP9P0CG40 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.64■□□□□ 0.42
SP9P0CG40 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.64■□□□□ 0.41
SP9P0CG40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 INGX-202ENST00000489074 768 ntBASIC17.64■□□□□ 0.41
SP9P0CG40 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SP9P0CG40 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.64■□□□□ 0.41
SP9P0CG40 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 REXO1L3P-201ENST00000622202 1288 ntBASIC17.64■□□□□ 0.41
SP9P0CG40 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 AC125437.2-201ENST00000625180 2167 ntBASIC17.64■□□□□ 0.41
SP9P0CG40 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.64■□□□□ 0.41
SP9P0CG40 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.64■□□□□ 0.41
SP9P0CG40 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.64■□□□□ 0.41
SP9P0CG40 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SP9P0CG40 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.64■□□□□ 0.41
SP9P0CG40 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.63■□□□□ 0.41
SP9P0CG40 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SP9P0CG40 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 AL121761.2-201ENST00000598007 1648 ntBASIC17.63■□□□□ 0.41
SP9P0CG40 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.63■□□□□ 0.41
SP9P0CG40 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.63■□□□□ 0.41
SP9P0CG40 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.63■□□□□ 0.41
SP9P0CG40 DUX4L27-201ENST00000554796 1261 ntBASIC17.63■□□□□ 0.41
SP9P0CG40 AC087641.1-201ENST00000557561 1021 ntBASIC17.63■□□□□ 0.41
SP9P0CG40 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SP9P0CG40 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SP9P0CG40 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SP9P0CG40 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.63■□□□□ 0.41
SP9P0CG40 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SP9P0CG40 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SP9P0CG40 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.62■□□□□ 0.41
SP9P0CG40 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.62■□□□□ 0.41
SP9P0CG40 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 AC148477.5-201ENST00000625164 1645 ntBASIC17.62■□□□□ 0.41
SP9P0CG40 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms