Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 NKTR-203ENST00000442970 646 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 AC093214.1-201ENST00000511688 1107 ntBASIC26.85■■□□□ 1.89
RAPGEF3O95398 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 AC236430.1-201ENST00000402231 743 ntBASIC26.84■■□□□ 1.89
RAPGEF3O95398 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 AL805961.1-202ENST00000641562 540 ntBASIC26.84■■□□□ 1.89
RAPGEF3O95398 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF3O95398 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF3O95398 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 AL121761.2-201ENST00000598007 1648 ntBASIC26.83■■□□□ 1.89
RAPGEF3O95398 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 NEK7-201ENST00000367383 586 ntTSL 2 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 PMS2P4-201ENST00000412466 1052 ntBASIC26.83■■□□□ 1.89
RAPGEF3O95398 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 RNA5SP421-201ENST00000516864 134 ntBASIC26.83■■□□□ 1.89
RAPGEF3O95398 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC26.83■■□□□ 1.89
RAPGEF3O95398 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF3O95398 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RAPGEF3O95398 SIRPAP1-201ENST00000448467 1770 ntBASIC26.82■■□□□ 1.88
RAPGEF3O95398 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF3O95398 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 POLD4-211ENST00000539074 714 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF3O95398 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
RAPGEF3O95398 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF3O95398 AL353593.2-201ENST00000602529 1483 ntBASIC26.81■■□□□ 1.88
RAPGEF3O95398 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
RAPGEF3O95398 AC002472.2-201ENST00000442739 958 ntBASIC26.81■■□□□ 1.88
RAPGEF3O95398 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.81■■□□□ 1.88
RAPGEF3O95398 AC087641.1-201ENST00000557561 1021 ntBASIC26.81■■□□□ 1.88
RAPGEF3O95398 AC015911.4-201ENST00000588022 1070 ntBASIC26.81■■□□□ 1.88
RAPGEF3O95398 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF3O95398 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RAPGEF3O95398 AL032819.2-201ENST00000624543 2162 ntBASIC26.81■■□□□ 1.88
RAPGEF3O95398 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC26.81■■□□□ 1.88
RAPGEF3O95398 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC26.81■■□□□ 1.88
RAPGEF3O95398 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 PCDHAC2-203ENST00000615316 3011 ntBASIC26.8■■□□□ 1.88
RAPGEF3O95398 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF3O95398 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF3O95398 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 AC103564.2-201ENST00000432853 1299 ntBASIC26.8■■□□□ 1.88
RAPGEF3O95398 PON3-205ENST00000451904 1053 ntTSL 3 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF3O95398 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms