Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL024508.2-201ENST00000607749 1894 ntBASIC19.07■□□□□ 0.64
SOX1O00570 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.07■□□□□ 0.64
SOX1O00570 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 MIR149-201ENST00000384879 89 ntBASIC19.07■□□□□ 0.64
SOX1O00570 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 TREML5P-201ENST00000421694 576 ntBASIC19.07■□□□□ 0.64
SOX1O00570 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 AC112698.1-201ENST00000510299 916 ntBASIC19.07■□□□□ 0.64
SOX1O00570 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX1O00570 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.07■□□□□ 0.64
SOX1O00570 AC068137.2-201ENST00000605408 478 ntBASIC19.07■□□□□ 0.64
SOX1O00570 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SOX1O00570 AC092919.2-201ENST00000623631 1645 ntBASIC19.07■□□□□ 0.64
SOX1O00570 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX1O00570 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SOX1O00570 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.06■□□□□ 0.64
SOX1O00570 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.06■□□□□ 0.64
SOX1O00570 HILS1-202ENST00000545329 423 ntBASIC19.06■□□□□ 0.64
SOX1O00570 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 AC007064.4-201ENST00000637740 555 ntBASIC19.06■□□□□ 0.64
SOX1O00570 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SOX1O00570 AC026310.3-201ENST00000625186 2373 ntBASIC19.06■□□□□ 0.64
SOX1O00570 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SOX1O00570 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SOX1O00570 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.05■□□□□ 0.64
SOX1O00570 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SOX1O00570 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SOX1O00570 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 AC107890.1-201ENST00000422478 521 ntBASIC19.05■□□□□ 0.64
SOX1O00570 SERBP1P5-201ENST00000510079 1181 ntBASIC19.05■□□□□ 0.64
SOX1O00570 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SOX1O00570 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SOX1O00570 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SOX1O00570 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.05■□□□□ 0.64
SOX1O00570 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.05■□□□□ 0.64
SOX1O00570 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SOX1O00570 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SOX1O00570 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX1O00570 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.04■□□□□ 0.64
SOX1O00570 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.04■□□□□ 0.64
SOX1O00570 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX1O00570 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.04■□□□□ 0.64
SOX1O00570 AC010336.2-201ENST00000564226 506 ntBASIC19.04■□□□□ 0.64
SOX1O00570 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.04■□□□□ 0.64
SOX1O00570 AC006116.8-202ENST00000587620 1550 ntBASIC19.04■□□□□ 0.64
SOX1O00570 AL132655.2-201ENST00000596276 594 ntBASIC19.04■□□□□ 0.64
SOX1O00570 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX1O00570 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms