Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
FOXN3O00409 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 AK4P3-201ENST00000418260 669 ntBASIC19.32■□□□□ 0.68
FOXN3O00409 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
FOXN3O00409 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
FOXN3O00409 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXN3O00409 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXN3O00409 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXN3O00409 FZD10-202ENST00000539839 3282 ntBASIC19.32■□□□□ 0.68
FOXN3O00409 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXN3O00409 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN3O00409 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN3O00409 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXN3O00409 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
FOXN3O00409 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FOXN3O00409 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
FOXN3O00409 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.31■□□□□ 0.68
FOXN3O00409 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXN3O00409 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN3O00409 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN3O00409 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
FOXN3O00409 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN3O00409 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FOXN3O00409 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXN3O00409 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN3O00409 HYMAI.1-201ENST00000620949 238 ntBASIC19.3■□□□□ 0.68
FOXN3O00409 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN3O00409 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN3O00409 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FOXN3O00409 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
FOXN3O00409 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
FOXN3O00409 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN3O00409 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN3O00409 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN3O00409 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXN3O00409 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN3O00409 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms