Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 AL161938.1-201ENST00000569833 2180 ntBASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC163A0A0D9SF12 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC163A0A0D9SF12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 AC099343.3-201ENST00000605834 2503 ntBASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 AL158211.5-201ENST00000623583 2518 ntBASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 AL645939.2-201ENST00000427340 991 ntBASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC163A0A0D9SF12 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 AC093484.2-201ENST00000580996 2166 ntBASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 AL020989.1-201ENST00000422979 469 ntBASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 CNN2P11-201ENST00000429351 262 ntBASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 VN2R19P-201ENST00000442399 1052 ntBASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms