Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB1Q9Y5G3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 GMCL1P1-201ENST00000463439 1581 ntBASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 UBE2SP1-201ENST00000450587 669 ntBASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 AC131212.4-201ENST00000623606 975 ntBASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGB1Q9Y5G3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 HTR7P1-201ENST00000538670 1336 ntBASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGB1Q9Y5G3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB1Q9Y5G3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB1Q9Y5G3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB1Q9Y5G3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGB1Q9Y5G3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms