Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 KRT18P65-201ENST00000439811 1286 ntBASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 AF238378.1-201ENST00000526806 358 ntBASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 TP73-AS1-210ENST00000637775 1455 ntBASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTDP1Q9Y5B0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 RCN1P2-201ENST00000398357 915 ntBASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 AC132008.2-207ENST00000454517 770 ntBASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTDP1Q9Y5B0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 AC005336.2-201ENST00000593183 939 ntBASIC20.83■□□□□ 0.93
CTDP1Q9Y5B0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTDP1Q9Y5B0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 SLC25A6P4-201ENST00000586535 553 ntBASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTDP1Q9Y5B0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms