Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 RBM17P3-201ENST00000417687 1192 ntBASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 ESPNP-201ENST00000270691 2015 ntBASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.41■□□□□ 0.38
LRIT1Q9P2V4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 AL031284.1-201ENST00000419297 478 ntBASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 AP001269.4-201ENST00000609611 512 ntBASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIT1Q9P2V4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRIT1Q9P2V4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRIT1Q9P2V4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.39■□□□□ 0.38
LRIT1Q9P2V4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 FGFR3P6-201ENST00000457012 610 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AC093909.1-201ENST00000504731 1122 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AC073648.2-201ENST00000510116 352 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 RNA5SP419-201ENST00000515908 135 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AC148477.8-201ENST00000624298 468 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms