Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 AC068472.1-201ENST00000474589 881 ntBASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 AC022898.2-201ENST00000616822 1312 ntBASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BLOC1S4Q9NUP1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 PCDHB18P-201ENST00000524813 2368 ntBASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 AC011498.5-201ENST00000592027 486 ntBASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.05■□□□□ 0.8
BLOC1S4Q9NUP1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 AC112698.1-201ENST00000510299 916 ntBASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 KRT18P35-201ENST00000510488 1269 ntBASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 AC116407.4-201ENST00000623319 1061 ntBASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms