Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 AC011676.5-201ENST00000624864 2660 ntBASIC18.82■□□□□ 0.6
DDX47Q9H0S4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 NKILA-202ENST00000614771 2598 ntBASIC18.82■□□□□ 0.6
DDX47Q9H0S4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 AC116562.2-201ENST00000507042 360 ntBASIC18.82■□□□□ 0.6
DDX47Q9H0S4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX47Q9H0S4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 MIR4651-201ENST00000582622 73 ntBASIC18.81■□□□□ 0.6
DDX47Q9H0S4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 CROCCP2-202ENST00000412962 2773 ntBASIC18.81■□□□□ 0.6
DDX47Q9H0S4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX47Q9H0S4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms