Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AP001094.4-201ENST00000579008 2176 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 KC6-207ENST00000600644 2311 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AL355472.2-201ENST00000422958 438 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 KRT18P11-201ENST00000435214 1283 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SUDS3P1-201ENST00000505831 966 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 RAP2CP1-201ENST00000605103 478 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SP2-202ENST00000613139 908 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC022211.2-201ENST00000585075 2527 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC008406.3-201ENST00000620001 1374 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms