Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.21■□□□□ 0.67
RAD9AQ99638 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 AC122714.2-201ENST00000502787 707 ntBASIC19.21■□□□□ 0.67
RAD9AQ99638 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.21■□□□□ 0.67
RAD9AQ99638 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAD9AQ99638 AC093484.2-201ENST00000580996 2166 ntBASIC19.21■□□□□ 0.67
RAD9AQ99638 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 SIGLEC16-201ENST00000599858 1437 ntBASIC19.21■□□□□ 0.67
RAD9AQ99638 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.21■□□□□ 0.67
RAD9AQ99638 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAD9AQ99638 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
RAD9AQ99638 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD9AQ99638 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAD9AQ99638 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAD9AQ99638 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
RAD9AQ99638 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.2■□□□□ 0.66
RAD9AQ99638 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD9AQ99638 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RAD9AQ99638 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD9AQ99638 AD001527.2-201ENST00000622994 785 ntBASIC19.2■□□□□ 0.66
RAD9AQ99638 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD9AQ99638 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAD9AQ99638 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD9AQ99638 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD9AQ99638 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 CRYGEP-201ENST00000412192 528 ntBASIC19.19■□□□□ 0.66
RAD9AQ99638 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
RAD9AQ99638 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.19■□□□□ 0.66
RAD9AQ99638 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD9AQ99638 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.19■□□□□ 0.66
RAD9AQ99638 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.19■□□□□ 0.66
RAD9AQ99638 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.19■□□□□ 0.66
RAD9AQ99638 AL589182.2-201ENST00000619332 1049 ntBASIC19.19■□□□□ 0.66
RAD9AQ99638 C20orf181-201ENST00000623918 480 ntBASIC19.19■□□□□ 0.66
RAD9AQ99638 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD9AQ99638 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.19■□□□□ 0.66
RAD9AQ99638 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD9AQ99638 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD9AQ99638 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAD9AQ99638 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RAD9AQ99638 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD9AQ99638 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD9AQ99638 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAD9AQ99638 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAD9AQ99638 SPDYE21P-201ENST00000413323 827 ntBASIC19.18■□□□□ 0.66
RAD9AQ99638 AC096633.1-201ENST00000422446 749 ntBASIC19.18■□□□□ 0.66
RAD9AQ99638 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.18■□□□□ 0.66
RAD9AQ99638 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.18■□□□□ 0.66
RAD9AQ99638 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD9AQ99638 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAD9AQ99638 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RAD9AQ99638 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD9AQ99638 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD9AQ99638 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD9AQ99638 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD9AQ99638 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD9AQ99638 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAD9AQ99638 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD9AQ99638 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAD9AQ99638 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms