Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CNTNAP3BQ96NU0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 AC112777.1-201ENST00000540175 1423 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 MIR661-201ENST00000384842 89 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 LAGE3P1-201ENST00000425356 484 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 AC109322.1-201ENST00000524499 1264 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 CR383656.12-201ENST00000549567 513 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 AC018845.2-201ENST00000568326 409 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 NKAPP1-205ENST00000585790 367 ntBASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNTNAP3BQ96NU0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CNTNAP3BQ96NU0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CNTNAP3BQ96NU0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
CNTNAP3BQ96NU0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNTNAP3BQ96NU0 AC026471.1-201ENST00000564629 3026 ntBASIC17.21■□□□□ 0.34
CNTNAP3BQ96NU0 BX323043.1-201ENST00000641006 1765 ntBASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 AC004835.2-201ENST00000603762 682 ntBASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNTNAP3BQ96NU0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 PLK5-205ENST00000642079 1969 ntBASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms