Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 TMPOP1-202ENST00000424642 1267 ntBASIC21.27■■□□□ 1
BRF1Q92994 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.27■■□□□ 1
BRF1Q92994 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.27■■□□□ 1
BRF1Q92994 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.27■■□□□ 1
BRF1Q92994 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.27■■□□□ 1
BRF1Q92994 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BRF1Q92994 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
BRF1Q92994 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
BRF1Q92994 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRF1Q92994 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRF1Q92994 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRF1Q92994 AC100803.2-201ENST00000562459 1963 ntBASIC21.27■□□□□ 0.99
BRF1Q92994 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.26■□□□□ 0.99
BRF1Q92994 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BRF1Q92994 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.26■□□□□ 0.99
BRF1Q92994 HBZP1-201ENST00000354915 429 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.26■□□□□ 0.99
BRF1Q92994 AC092647.4-201ENST00000457211 535 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 AC063952.2-201ENST00000498792 1227 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 AC113404.2-201ENST00000507884 177 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
BRF1Q92994 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.26■□□□□ 0.99
BRF1Q92994 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.26■□□□□ 0.99
BRF1Q92994 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRF1Q92994 KRT89P-201ENST00000620027 1478 ntBASIC21.26■□□□□ 0.99
BRF1Q92994 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
BRF1Q92994 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
BRF1Q92994 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
BRF1Q92994 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BRF1Q92994 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.25■□□□□ 0.99
BRF1Q92994 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.25■□□□□ 0.99
BRF1Q92994 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.25■□□□□ 0.99
BRF1Q92994 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 FAM8A6P-201ENST00000407496 1135 ntBASIC21.25■□□□□ 0.99
BRF1Q92994 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRF1Q92994 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 DUX4L26-201ENST00000489078 1255 ntBASIC21.25■□□□□ 0.99
BRF1Q92994 KRT18P21-201ENST00000515767 1272 ntBASIC21.25■□□□□ 0.99
BRF1Q92994 DUTP2-201ENST00000519164 463 ntBASIC21.25■□□□□ 0.99
BRF1Q92994 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.25■□□□□ 0.99
BRF1Q92994 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.25■□□□□ 0.99
BRF1Q92994 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.25■□□□□ 0.99
BRF1Q92994 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRF1Q92994 KRT18P55-202ENST00000578578 1546 ntBASIC21.24■□□□□ 0.99
BRF1Q92994 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.24■□□□□ 0.99
BRF1Q92994 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.24■□□□□ 0.99
BRF1Q92994 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BRF1Q92994 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.24■□□□□ 0.99
BRF1Q92994 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRF1Q92994 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.24■□□□□ 0.99
BRF1Q92994 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.24■□□□□ 0.99
BRF1Q92994 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.24■□□□□ 0.99
BRF1Q92994 VENTXP5-201ENST00000523979 775 ntBASIC21.24■□□□□ 0.99
BRF1Q92994 AC022616.7-201ENST00000525383 220 ntBASIC21.24■□□□□ 0.99
BRF1Q92994 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.24■□□□□ 0.99
BRF1Q92994 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.24■□□□□ 0.99
BRF1Q92994 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.24■□□□□ 0.99
BRF1Q92994 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms