Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 SLC25A3P1-201ENST00000443844 931 ntBASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 AL157888.1-201ENST00000631930 593 ntBASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSMEM1Q8N8F7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 AC034232.1-201ENST00000506026 1064 ntBASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 AL031432.5-201ENST00000641059 760 ntBASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSMEM1Q8N8F7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms