Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AC005332.8-201ENST00000622750 2735 ntBASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AL845331.1-201ENST00000424978 1190 ntBASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AC246785.2-201ENST00000432512 513 ntBASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC33Q8N5R6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 TSPY22P-201ENST00000427496 604 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 UNC93B7-201ENST00000509439 705 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 HCG11-201ENST00000411553 5696 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 KRT18P1-202ENST00000452408 1331 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 SDHAP2-201ENST00000455183 2001 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 AL163051.1-201ENST00000569214 1512 ntBASIC18.95■□□□□ 0.62
CCDC33Q8N5R6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 MIR662-201ENST00000384847 95 ntBASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 RNF126P1-202ENST00000569893 925 ntBASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC33Q8N5R6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC33Q8N5R6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms