Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.37■□□□□ 0.85
SHC4Q6S5L8 AL441883.1-201ENST00000566170 1045 ntBASIC20.37■□□□□ 0.85
SHC4Q6S5L8 AC012306.2-201ENST00000609350 630 ntBASIC20.37■□□□□ 0.85
SHC4Q6S5L8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHC4Q6S5L8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 RASA4DP-201ENST00000460726 1199 ntBASIC20.36■□□□□ 0.85
SHC4Q6S5L8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 AC113404.2-201ENST00000507884 177 ntBASIC20.36■□□□□ 0.85
SHC4Q6S5L8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC4Q6S5L8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 AC008687.5-201ENST00000593746 558 ntBASIC20.35■□□□□ 0.85
SHC4Q6S5L8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC4Q6S5L8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 AL391807.1-203ENST00000604392 2365 ntBASIC20.34■□□□□ 0.85
SHC4Q6S5L8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 SPDYE15P-201ENST00000424157 909 ntBASIC20.34■□□□□ 0.85
SHC4Q6S5L8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms