Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
SMIM11AP58511 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 AL023806.1-201ENST00000603994 1649 ntBASIC16.67■□□□□ 0.26
SMIM11AP58511 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 LINC01126-201ENST00000623515 1646 ntBASIC16.67■□□□□ 0.26
SMIM11AP58511 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SMIM11AP58511 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMIM11AP58511 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMIM11AP58511 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SMIM11AP58511 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 TSPY17P-201ENST00000450329 467 ntBASIC16.66■□□□□ 0.26
SMIM11AP58511 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 CD99P1-205ENST00000527459 561 ntBASIC16.66■□□□□ 0.26
SMIM11AP58511 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.66■□□□□ 0.26
SMIM11AP58511 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMIM11AP58511 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
SMIM11AP58511 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
SMIM11AP58511 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM11AP58511 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 SLC25A1P2-201ENST00000430693 912 ntBASIC16.65■□□□□ 0.26
SMIM11AP58511 AC104390.1-201ENST00000555663 520 ntBASIC16.65■□□□□ 0.26
SMIM11AP58511 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.65■□□□□ 0.26
SMIM11AP58511 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.65■□□□□ 0.26
SMIM11AP58511 AP005242.2-201ENST00000580065 1175 ntBASIC16.65■□□□□ 0.26
SMIM11AP58511 AC008687.5-201ENST00000593746 558 ntBASIC16.65■□□□□ 0.26
SMIM11AP58511 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 AC022898.2-201ENST00000616822 1312 ntBASIC16.65■□□□□ 0.26
SMIM11AP58511 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM11AP58511 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM11AP58511 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMIM11AP58511 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMIM11AP58511 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMIM11AP58511 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM11AP58511 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM11AP58511 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM11AP58511 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.64■□□□□ 0.25
SMIM11AP58511 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.64■□□□□ 0.25
SMIM11AP58511 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.64■□□□□ 0.25
SMIM11AP58511 AC112497.1-201ENST00000624824 639 ntBASIC16.64■□□□□ 0.25
SMIM11AP58511 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.64■□□□□ 0.25
SMIM11AP58511 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SMIM11AP58511 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM11AP58511 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms