Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC4P55056 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.23□□□□□ -0.29
APOC4P55056 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
APOC4P55056 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
APOC4P55056 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.22□□□□□ -0.29
APOC4P55056 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 LINC01126-201ENST00000623515 1646 ntBASIC13.22□□□□□ -0.29
APOC4P55056 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
APOC4P55056 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 TSPY19P-201ENST00000418461 509 ntBASIC13.22□□□□□ -0.29
APOC4P55056 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 TSPY18P-201ENST00000441642 509 ntBASIC13.22□□□□□ -0.29
APOC4P55056 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC4P55056 KRT16P4-201ENST00000453883 522 ntBASIC13.22□□□□□ -0.29
APOC4P55056 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC4P55056 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.22□□□□□ -0.29
APOC4P55056 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC4P55056 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOC4P55056 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC4P55056 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
APOC4P55056 OR6D1P-203ENST00000641209 4860 ntBASIC13.22□□□□□ -0.29
APOC4P55056 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 AC126763.1-201ENST00000552015 2118 ntBASIC13.21□□□□□ -0.29
APOC4P55056 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 AC022898.2-201ENST00000616822 1312 ntBASIC13.21□□□□□ -0.29
APOC4P55056 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC4P55056 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 NUS1P2-201ENST00000417358 873 ntBASIC13.21□□□□□ -0.29
APOC4P55056 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC4P55056 MTCL1P1-201ENST00000446207 792 ntBASIC13.21□□□□□ -0.29
APOC4P55056 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC4P55056 KRT18P31-201ENST00000506277 1292 ntBASIC13.21□□□□□ -0.29
APOC4P55056 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC4P55056 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC4P55056 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms