Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CENPAP49450 AC138028.4-201ENST00000564984 1845 ntBASIC16.4■□□□□ 0.22
CENPAP49450 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.4■□□□□ 0.22
CENPAP49450 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPAP49450 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CENPAP49450 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CENPAP49450 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.39■□□□□ 0.22
CENPAP49450 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.39■□□□□ 0.22
CENPAP49450 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.39■□□□□ 0.22
CENPAP49450 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CENPAP49450 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CENPAP49450 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPAP49450 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPAP49450 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 RBM17P1-201ENST00000453646 1190 ntBASIC16.39■□□□□ 0.21
CENPAP49450 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.39■□□□□ 0.21
CENPAP49450 AC009065.1-201ENST00000564055 1225 ntBASIC16.39■□□□□ 0.21
CENPAP49450 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.39■□□□□ 0.21
CENPAP49450 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.39■□□□□ 0.21
CENPAP49450 AP000525.1-201ENST00000608286 694 ntBASIC16.39■□□□□ 0.21
CENPAP49450 AP006294.2-201ENST00000641667 209 ntBASIC16.39■□□□□ 0.21
CENPAP49450 PCDHB18P-201ENST00000524813 2368 ntBASIC16.39■□□□□ 0.21
CENPAP49450 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CENPAP49450 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CENPAP49450 AC068880.1-201ENST00000507289 2297 ntBASIC16.39■□□□□ 0.21
CENPAP49450 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPAP49450 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.39■□□□□ 0.21
CENPAP49450 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CENPAP49450 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 MIR1238-201ENST00000408483 83 ntBASIC16.38■□□□□ 0.21
CENPAP49450 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPAP49450 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 AL390955.1-201ENST00000428694 934 ntBASIC16.38■□□□□ 0.21
CENPAP49450 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.38■□□□□ 0.21
CENPAP49450 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPAP49450 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPAP49450 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPAP49450 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CENPAP49450 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.38■□□□□ 0.21
CENPAP49450 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CENPAP49450 AC008764.6-201ENST00000595909 2069 ntBASIC16.38■□□□□ 0.21
CENPAP49450 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.37■□□□□ 0.21
CENPAP49450 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CENPAP49450 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CENPAP49450 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 AC007326.2-201ENST00000624224 7579 ntBASIC16.37■□□□□ 0.21
CENPAP49450 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CENPAP49450 CCR12P-201ENST00000446203 998 ntBASIC16.37■□□□□ 0.21
CENPAP49450 AP003041.3-201ENST00000527151 707 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms