Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CCL1P22362 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCL1P22362 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL1P22362 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL1P22362 LINC01568-207ENST00000641790 1380 ntBASIC15.55■□□□□ 0.08
CCL1P22362 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCL1P22362 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCL1P22362 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL1P22362 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL1P22362 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL1P22362 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL1P22362 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL1P22362 AC141257.4-201ENST00000634557 245 ntBASIC15.55■□□□□ 0.08
CCL1P22362 AC136944.6-201ENST00000634818 245 ntBASIC15.55■□□□□ 0.08
CCL1P22362 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 LINC00602-201ENST00000629776 2065 ntBASIC15.55■□□□□ 0.08
CCL1P22362 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL1P22362 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCL1P22362 LINC00304-203ENST00000565008 1864 ntBASIC15.54■□□□□ 0.08
CCL1P22362 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 KRT18P22-201ENST00000402024 1347 ntBASIC15.54■□□□□ 0.08
CCL1P22362 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CCL1P22362 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL1P22362 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL1P22362 AC116407.2-201ENST00000613639 860 ntBASIC15.54■□□□□ 0.08
CCL1P22362 AL138966.2-201ENST00000621997 464 ntBASIC15.54■□□□□ 0.08
CCL1P22362 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL1P22362 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL1P22362 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CCL1P22362 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL1P22362 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL1P22362 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 KRT18P65-201ENST00000439811 1286 ntBASIC15.53■□□□□ 0.08
CCL1P22362 AC034232.1-201ENST00000506026 1064 ntBASIC15.53■□□□□ 0.08
CCL1P22362 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL1P22362 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 AC108860.2-201ENST00000562760 2183 ntBASIC15.53■□□□□ 0.08
CCL1P22362 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL1P22362 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL1P22362 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 AC141586.5-201ENST00000624546 2050 ntBASIC15.53■□□□□ 0.08
CCL1P22362 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms