Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 AC100803.2-201ENST00000562459 1963 ntBASIC17.75■□□□□ 0.43
CDC7O00311 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC7O00311 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 LINC00167-201ENST00000530583 1419 ntBASIC17.74■□□□□ 0.43
CDC7O00311 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CDC7O00311 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC7O00311 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC7O00311 TERF1P1-201ENST00000311003 1181 ntBASIC17.74■□□□□ 0.43
CDC7O00311 AC113347.1-201ENST00000413321 391 ntBASIC17.74■□□□□ 0.43
CDC7O00311 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC7O00311 RASA4DP-201ENST00000460726 1199 ntBASIC17.74■□□□□ 0.43
CDC7O00311 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC7O00311 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC7O00311 COX11P1-201ENST00000489116 835 ntBASIC17.74■□□□□ 0.43
CDC7O00311 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 AC005363.2-201ENST00000618631 242 ntBASIC17.74■□□□□ 0.43
CDC7O00311 AC011558.1-201ENST00000623459 338 ntBASIC17.74■□□□□ 0.43
CDC7O00311 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDC7O00311 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC7O00311 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC7O00311 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC7O00311 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC7O00311 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDC7O00311 LINC00602-201ENST00000629776 2065 ntBASIC17.73■□□□□ 0.43
CDC7O00311 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CDC7O00311 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC7O00311 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.73■□□□□ 0.43
CDC7O00311 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC7O00311 AL137013.1-201ENST00000432946 1228 ntBASIC17.73■□□□□ 0.43
CDC7O00311 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC7O00311 AC034232.1-201ENST00000506026 1064 ntBASIC17.73■□□□□ 0.43
CDC7O00311 DUTP2-201ENST00000519164 463 ntBASIC17.73■□□□□ 0.43
CDC7O00311 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC7O00311 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CDC7O00311 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC7O00311 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDC7O00311 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.73■□□□□ 0.43
CDC7O00311 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC7O00311 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC7O00311 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 AC073508.3-201ENST00000619697 1419 ntBASIC17.72■□□□□ 0.43
CDC7O00311 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC7O00311 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC7O00311 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDC7O00311 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDC7O00311 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDC7O00311 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CDC7O00311 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDC7O00311 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.72■□□□□ 0.43
CDC7O00311 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC7O00311 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.72■□□□□ 0.43
CDC7O00311 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDC7O00311 AC139887.4-201ENST00000607877 719 ntBASIC17.72■□□□□ 0.43
CDC7O00311 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC7O00311 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms