Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
PDLIM1O00151 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDLIM1O00151 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.24■□□□□ 0.35
PDLIM1O00151 AC012618.2-201ENST00000428058 849 ntBASIC17.24■□□□□ 0.35
PDLIM1O00151 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 AC233702.5-201ENST00000584107 538 ntBASIC17.24■□□□□ 0.35
PDLIM1O00151 Z99916.2-201ENST00000604037 246 ntBASIC17.24■□□□□ 0.35
PDLIM1O00151 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDLIM1O00151 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM1O00151 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM1O00151 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 KRT8P45-201ENST00000414328 1447 ntBASIC17.23■□□□□ 0.35
PDLIM1O00151 AL135905.2-201ENST00000584934 1404 ntBASIC17.23■□□□□ 0.35
PDLIM1O00151 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 RPS2P55-201ENST00000397318 883 ntBASIC17.23■□□□□ 0.35
PDLIM1O00151 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 AC107956.1-201ENST00000494359 873 ntBASIC17.23■□□□□ 0.35
PDLIM1O00151 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 AL160286.2-201ENST00000567150 934 ntBASIC17.23■□□□□ 0.35
PDLIM1O00151 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDLIM1O00151 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDLIM1O00151 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDLIM1O00151 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 HTR7P1-201ENST00000538670 1336 ntBASIC17.22■□□□□ 0.35
PDLIM1O00151 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM1O00151 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 PCDHA1-201ENST00000378133 2726 ntBASIC17.22■□□□□ 0.35
PDLIM1O00151 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM1O00151 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms