Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP17L4A6NCW7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.71■■□□□ 1.07
USP17L4A6NCW7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP17L4A6NCW7 AP002414.3-201ENST00000589352 1468 ntBASIC21.71■■□□□ 1.07
USP17L4A6NCW7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AC005082.1-201ENST00000413042 2259 ntBASIC21.7■■□□□ 1.06
USP17L4A6NCW7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AC007967.3-201ENST00000434308 558 ntBASIC21.7■■□□□ 1.06
USP17L4A6NCW7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 UNC93B6-202ENST00000528242 690 ntBASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 AC097374.2-201ENST00000618617 1306 ntBASIC21.7■■□□□ 1.06
USP17L4A6NCW7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
USP17L4A6NCW7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.69■■□□□ 1.06
USP17L4A6NCW7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 RPSAP43-201ENST00000402237 625 ntBASIC21.68■■□□□ 1.06
USP17L4A6NCW7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 LAGE3P1-201ENST00000425356 484 ntBASIC21.68■■□□□ 1.06
USP17L4A6NCW7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 AC010327.4-202ENST00000591484 748 ntBASIC21.68■■□□□ 1.06
USP17L4A6NCW7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.68■■□□□ 1.06
USP17L4A6NCW7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 AP000974.1-201ENST00000623909 2387 ntBASIC21.68■■□□□ 1.06
USP17L4A6NCW7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP17L4A6NCW7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 GPX1P2-201ENST00000429271 606 ntBASIC21.67■■□□□ 1.06
USP17L4A6NCW7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP17L4A6NCW7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 YBX2P1-201ENST00000394192 760 ntBASIC21.66■■□□□ 1.06
USP17L4A6NCW7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP17L4A6NCW7 AC040169.1-201ENST00000565382 521 ntBASIC21.66■■□□□ 1.06
USP17L4A6NCW7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms