Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
VPS11Q9H270 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.23■□□□□ 0.51
VPS11Q9H270 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS11Q9H270 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.23■□□□□ 0.51
VPS11Q9H270 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VPS11Q9H270 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VPS11Q9H270 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.22■□□□□ 0.51
VPS11Q9H270 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VPS11Q9H270 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS11Q9H270 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.22■□□□□ 0.51
VPS11Q9H270 CRYGFP-201ENST00000418459 633 ntBASIC18.22■□□□□ 0.51
VPS11Q9H270 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS11Q9H270 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.22■□□□□ 0.51
VPS11Q9H270 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
VPS11Q9H270 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VPS11Q9H270 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS11Q9H270 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VPS11Q9H270 AC036111.1-201ENST00000533973 1582 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 AD000864.1-201ENST00000624076 2295 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VPS11Q9H270 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.21■□□□□ 0.51
VPS11Q9H270 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS11Q9H270 MIR4674-201ENST00000582457 87 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS11Q9H270 AC124067.4-201ENST00000519691 2379 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 AL163051.1-201ENST00000569214 1512 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 SDHAP2-201ENST00000455183 2001 ntBASIC18.21■□□□□ 0.51
VPS11Q9H270 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VPS11Q9H270 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS11Q9H270 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS11Q9H270 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS11Q9H270 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VPS11Q9H270 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
VPS11Q9H270 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 KRT18P55-202ENST00000578578 1546 ntBASIC18.2■□□□□ 0.5
VPS11Q9H270 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 CA15P1-201ENST00000481698 905 ntBASIC18.2■□□□□ 0.5
VPS11Q9H270 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.2■□□□□ 0.5
VPS11Q9H270 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS11Q9H270 ITM2C-210ENST00000620962 501 ntBASIC18.2■□□□□ 0.5
VPS11Q9H270 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VPS11Q9H270 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VPS11Q9H270 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms