Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC236430.1-201ENST00000402231 743 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC022494.1-201ENST00000466044 728 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC007967.3-201ENST00000434308 558 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 VN2R19P-201ENST00000442399 1052 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 KRT19P2-202ENST00000557173 1012 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AC006557.2-201ENST00000592985 1240 ntBASIC15.16■□□□□ 0.02
CSMD2Q7Z408 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD2Q7Z408 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 OR8S1-201ENST00000310194 1080 ntBASIC15.15■□□□□ 0.02
CSMD2Q7Z408 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AP005018.1-201ENST00000525475 301 ntBASIC15.15■□□□□ 0.02
CSMD2Q7Z408 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC009154.2-201ENST00000621177 724 ntBASIC15.15■□□□□ 0.02
CSMD2Q7Z408 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 AC022145.2-201ENST00000598203 171 ntBASIC15.15■□□□□ 0.02
CSMD2Q7Z408 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 LINC01126-201ENST00000623515 1646 ntBASIC15.15■□□□□ 0.02
CSMD2Q7Z408 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CSMD2Q7Z408 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AL606495.2-201ENST00000605867 535 ntBASIC15.14■□□□□ 0.01
CSMD2Q7Z408 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms