Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox17Q61473 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sox17Q61473 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sox17Q61473 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox17Q61473 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.25□□□□□ -0.13
Sox17Q61473 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.25□□□□□ -0.13
Sox17Q61473 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.25□□□□□ -0.13
Sox17Q61473 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sox17Q61473 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sox17Q61473 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox17Q61473 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox17Q61473 Gm22697-201ENSMUST00000175194 63 ntBASIC14.24□□□□□ -0.13
Sox17Q61473 Gm43799-201ENSMUST00000201845 579 ntBASIC14.24□□□□□ -0.13
Sox17Q61473 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox17Q61473 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox17Q61473 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox17Q61473 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox17Q61473 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox17Q61473 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox17Q61473 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
Sox17Q61473 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox17Q61473 Gm25406-201ENSMUST00000157599 105 ntBASIC14.23□□□□□ -0.13
Sox17Q61473 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.23□□□□□ -0.13
Sox17Q61473 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.23□□□□□ -0.13
Sox17Q61473 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox17Q61473 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.23□□□□□ -0.13
Sox17Q61473 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox17Q61473 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms