Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.97■□□□□ 0.47
NUBP1P53384 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC17.97■□□□□ 0.47
NUBP1P53384 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.97■□□□□ 0.47
NUBP1P53384 AC108073.2-201ENST00000464002 357 ntBASIC17.97■□□□□ 0.47
NUBP1P53384 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 AL359881.2-201ENST00000602973 570 ntBASIC17.97■□□□□ 0.47
NUBP1P53384 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
NUBP1P53384 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NUBP1P53384 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NUBP1P53384 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NUBP1P53384 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.96■□□□□ 0.47
NUBP1P53384 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 AC009102.3-201ENST00000623118 1491 ntBASIC17.96■□□□□ 0.47
NUBP1P53384 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.96■□□□□ 0.47
NUBP1P53384 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NUBP1P53384 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
NUBP1P53384 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.96■□□□□ 0.47
NUBP1P53384 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
NUBP1P53384 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.96■□□□□ 0.47
NUBP1P53384 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.96■□□□□ 0.47
NUBP1P53384 AC096734.2-201ENST00000562054 433 ntBASIC17.96■□□□□ 0.47
NUBP1P53384 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.96■□□□□ 0.47
NUBP1P53384 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NUBP1P53384 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.96■□□□□ 0.47
NUBP1P53384 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
NUBP1P53384 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NUBP1P53384 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUBP1P53384 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NUBP1P53384 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUBP1P53384 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUBP1P53384 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUBP1P53384 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
NUBP1P53384 FAM58CP-201ENST00000435741 640 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 AL117351.1-201ENST00000438864 766 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.95■□□□□ 0.46
NUBP1P53384 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.95■□□□□ 0.46
NUBP1P53384 INGX-202ENST00000489074 768 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.95■□□□□ 0.46
NUBP1P53384 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.95■□□□□ 0.46
NUBP1P53384 DUX4L17-201ENST00000557360 1267 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 AC016180.1-201ENST00000567945 403 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.95■□□□□ 0.46
NUBP1P53384 AC010654.1-201ENST00000615722 808 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 MIR6752-201ENST00000618442 71 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 AC105339.1-204ENST00000636249 355 ntBASIC17.95■□□□□ 0.46
NUBP1P53384 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUBP1P53384 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NUBP1P53384 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUBP1P53384 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.95■□□□□ 0.46
NUBP1P53384 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.95■□□□□ 0.46
NUBP1P53384 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.94■□□□□ 0.46
NUBP1P53384 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC17.94■□□□□ 0.46
NUBP1P53384 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.94■□□□□ 0.46
NUBP1P53384 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 AC023141.5-201ENST00000458585 616 ntBASIC17.94■□□□□ 0.46
NUBP1P53384 AC074386.1-202ENST00000463561 864 ntBASIC17.94■□□□□ 0.46
NUBP1P53384 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC17.94■□□□□ 0.46
NUBP1P53384 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.94■□□□□ 0.46
NUBP1P53384 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC17.94■□□□□ 0.46
NUBP1P53384 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.94■□□□□ 0.46
NUBP1P53384 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NUBP1P53384 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NUBP1P53384 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUBP1P53384 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.94■□□□□ 0.46
NUBP1P53384 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms