Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 NEFHP1-201ENST00000412845 2629 ntBASIC17.35■□□□□ 0.37
PRICKLE3O43900 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 AC092119.3-201ENST00000612618 583 ntBASIC17.34■□□□□ 0.37
PRICKLE3O43900 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE3O43900 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE3O43900 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE3O43900 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE3O43900 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE3O43900 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 FLJ13224-201ENST00000313737 1514 ntBASIC17.33■□□□□ 0.37
PRICKLE3O43900 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE3O43900 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.33■□□□□ 0.37
PRICKLE3O43900 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 AC091607.1-201ENST00000490318 1060 ntBASIC17.33■□□□□ 0.36
PRICKLE3O43900 AC112698.1-201ENST00000510299 916 ntBASIC17.33■□□□□ 0.36
PRICKLE3O43900 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 AC092329.2-201ENST00000598402 547 ntBASIC17.33■□□□□ 0.36
PRICKLE3O43900 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.33■□□□□ 0.36
PRICKLE3O43900 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms