Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTCAO00442 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
RTCAO00442 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.28■□□□□ 0.36
RTCAO00442 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.28■□□□□ 0.36
RTCAO00442 HLA-F-220ENST00000434407 884 ntBASIC17.28■□□□□ 0.36
RTCAO00442 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.28■□□□□ 0.36
RTCAO00442 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.28■□□□□ 0.36
RTCAO00442 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.28■□□□□ 0.36
RTCAO00442 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.28■□□□□ 0.36
RTCAO00442 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RTCAO00442 HYMAI.1-201ENST00000620949 238 ntBASIC17.28■□□□□ 0.36
RTCAO00442 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.28■□□□□ 0.36
RTCAO00442 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTCAO00442 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RTCAO00442 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.28■□□□□ 0.36
RTCAO00442 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.27■□□□□ 0.36
RTCAO00442 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RTCAO00442 AC068880.1-201ENST00000507289 2297 ntBASIC17.27■□□□□ 0.36
RTCAO00442 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.27■□□□□ 0.36
RTCAO00442 AC132938.6-201ENST00000623828 1655 ntBASIC17.27■□□□□ 0.36
RTCAO00442 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RTCAO00442 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 HBZP1-201ENST00000354915 429 ntBASIC17.27■□□□□ 0.36
RTCAO00442 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTCAO00442 VENTXP5-201ENST00000523979 775 ntBASIC17.27■□□□□ 0.36
RTCAO00442 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.27■□□□□ 0.36
RTCAO00442 AC024563.2-201ENST00000603282 481 ntBASIC17.27■□□□□ 0.36
RTCAO00442 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.27■□□□□ 0.35
RTCAO00442 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 LINC00602-201ENST00000629776 2065 ntBASIC17.27■□□□□ 0.35
RTCAO00442 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTCAO00442 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.26■□□□□ 0.35
RTCAO00442 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RTCAO00442 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 AC067852.2-201ENST00000590513 2313 ntBASIC17.26■□□□□ 0.35
RTCAO00442 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RTCAO00442 FZD10-202ENST00000539839 3282 ntBASIC17.26■□□□□ 0.35
RTCAO00442 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.26■□□□□ 0.35
RTCAO00442 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.26■□□□□ 0.35
RTCAO00442 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.26■□□□□ 0.35
RTCAO00442 FAM8A6P-201ENST00000407496 1135 ntBASIC17.26■□□□□ 0.35
RTCAO00442 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
RTCAO00442 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.26■□□□□ 0.35
RTCAO00442 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 FAM210CP-201ENST00000445714 574 ntBASIC17.26■□□□□ 0.35
RTCAO00442 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.26■□□□□ 0.35
RTCAO00442 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.26■□□□□ 0.35
RTCAO00442 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.26■□□□□ 0.35
RTCAO00442 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTCAO00442 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTCAO00442 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.25■□□□□ 0.35
RTCAO00442 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTCAO00442 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms