Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC28A1O00337 AC008687.5-201ENST00000593746 558 ntBASIC17.45■□□□□ 0.38
SLC28A1O00337 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A1O00337 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A1O00337 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A1O00337 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A1O00337 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SLC28A1O00337 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 LTB4R2-202ENST00000528054 3092 ntBASIC17.44■□□□□ 0.38
SLC28A1O00337 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SLC28A1O00337 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
SLC28A1O00337 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC28A1O00337 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A1O00337 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC28A1O00337 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A1O00337 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A1O00337 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SLC28A1O00337 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC28A1O00337 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A1O00337 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A1O00337 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC28A1O00337 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A1O00337 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A1O00337 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
SLC28A1O00337 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 INGX-201ENST00000359239 846 ntBASIC17.42■□□□□ 0.38
SLC28A1O00337 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC28A1O00337 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC28A1O00337 AC009947.2-201ENST00000444014 672 ntBASIC17.42■□□□□ 0.38
SLC28A1O00337 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC28A1O00337 NAPSB-206ENST00000562112 1266 ntBASIC17.42■□□□□ 0.38
SLC28A1O00337 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC28A1O00337 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A1O00337 AC024243.1-201ENST00000609234 778 ntBASIC17.42■□□□□ 0.38
SLC28A1O00337 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC28A1O00337 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A1O00337 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC28A1O00337 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms