Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LAMB4A4D0S4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LAMB4A4D0S4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LAMB4A4D0S4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 DDX43P3-201ENST00000441064 443 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 TNXA-203ENST00000507684 2038 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 AC073621.1-201ENST00000392730 636 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 BX005266.1-201ENST00000473402 457 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 DUTP2-201ENST00000519164 463 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.71■■□□□ 1.23
LAMB4A4D0S4 AC116407.3-201ENST00000623905 1129 ntBASIC22.71■■□□□ 1.23
LAMB4A4D0S4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
LAMB4A4D0S4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
LAMB4A4D0S4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 NCF1C-201ENST00000438382 1427 ntBASIC22.7■■□□□ 1.22
LAMB4A4D0S4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 SPDYE21P-201ENST00000413323 827 ntBASIC22.7■■□□□ 1.22
LAMB4A4D0S4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 RPL13AP23-201ENST00000480739 586 ntBASIC22.7■■□□□ 1.22
LAMB4A4D0S4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 AL356488.2-201ENST00000602755 427 ntBASIC22.7■■□□□ 1.22
LAMB4A4D0S4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LAMB4A4D0S4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 AC022898.2-201ENST00000616822 1312 ntBASIC22.69■■□□□ 1.22
LAMB4A4D0S4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 HLA-J-201ENST00000462773 1622 ntBASIC22.69■■□□□ 1.22
LAMB4A4D0S4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LAMB4A4D0S4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.68■■□□□ 1.22
LAMB4A4D0S4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.68■■□□□ 1.22
LAMB4A4D0S4 RNA5SP415-201ENST00000517246 115 ntBASIC22.68■■□□□ 1.22
LAMB4A4D0S4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms