Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm38225-201ENSMUST00000194001 393 ntBASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm2810-201ENSMUST00000118681 990 ntBASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm12428-201ENSMUST00000119844 727 ntBASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm18737-201ENSMUST00000173594 937 ntBASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3854A0A1B0GSS6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.02
Gm3854A0A1B0GSS6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.02
Gm3854A0A1B0GSS6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm6415-201ENSMUST00000118488 348 ntBASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Mir6977-201ENSMUST00000184960 64 ntBASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm3854A0A1B0GSS6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm15483-201ENSMUST00000120338 456 ntBASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm9824-201ENSMUST00000178707 561 ntBASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Gm17837-201ENSMUST00000186435 985 ntBASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3854A0A1B0GSS6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms