Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn5aQ9JJV9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn5aQ9JJV9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Scn5aQ9JJV9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Scn5aQ9JJV9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.86■■□□□ 1.41
Scn5aQ9JJV9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn5aQ9JJV9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Scn5aQ9JJV9 Gm14117-201ENSMUST00000122417 843 ntBASIC23.84■■□□□ 1.41
Scn5aQ9JJV9 Gm45444-201ENSMUST00000211394 898 ntBASIC23.84■■□□□ 1.41
Scn5aQ9JJV9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn5aQ9JJV9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn5aQ9JJV9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.84■■□□□ 1.41
Scn5aQ9JJV9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn5aQ9JJV9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scn5aQ9JJV9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn5aQ9JJV9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn5aQ9JJV9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn5aQ9JJV9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.81■■□□□ 1.4
Scn5aQ9JJV9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Scn5aQ9JJV9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn5aQ9JJV9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn5aQ9JJV9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn5aQ9JJV9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn5aQ9JJV9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn5aQ9JJV9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn5aQ9JJV9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn5aQ9JJV9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn5aQ9JJV9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Scn5aQ9JJV9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn5aQ9JJV9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn5aQ9JJV9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.76■■□□□ 1.39
Scn5aQ9JJV9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn5aQ9JJV9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn5aQ9JJV9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn5aQ9JJV9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn5aQ9JJV9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn5aQ9JJV9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 Gm15039-201ENSMUST00000118914 875 ntBASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Scn5aQ9JJV9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn5aQ9JJV9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn5aQ9JJV9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.72■■□□□ 1.39
Scn5aQ9JJV9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn5aQ9JJV9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn5aQ9JJV9 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.71■■□□□ 1.39
Scn5aQ9JJV9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Scn5aQ9JJV9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Scn5aQ9JJV9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn5aQ9JJV9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn5aQ9JJV9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn5aQ9JJV9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Scn5aQ9JJV9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Scn5aQ9JJV9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Scn5aQ9JJV9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Rps24-207ENSMUST00000224568 714 ntBASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn5aQ9JJV9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.66■■□□□ 1.38
Scn5aQ9JJV9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn5aQ9JJV9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.65■■□□□ 1.38
Scn5aQ9JJV9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Scn5aQ9JJV9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn5aQ9JJV9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms