Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.2■□□□□ 0.98
Ndc1Q8VCB1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ndc1Q8VCB1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc1Q8VCB1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc1Q8VCB1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
Ndc1Q8VCB1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ndc1Q8VCB1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.17■□□□□ 0.98
Ndc1Q8VCB1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ndc1Q8VCB1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndc1Q8VCB1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc1Q8VCB1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc1Q8VCB1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.14■□□□□ 0.97
Ndc1Q8VCB1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ndc1Q8VCB1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Ndc1Q8VCB1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc1Q8VCB1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc1Q8VCB1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc1Q8VCB1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc1Q8VCB1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc1Q8VCB1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc1Q8VCB1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ndc1Q8VCB1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ndc1Q8VCB1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc1Q8VCB1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc1Q8VCB1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc1Q8VCB1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc1Q8VCB1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc1Q8VCB1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc1Q8VCB1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.09■□□□□ 0.97
Ndc1Q8VCB1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ndc1Q8VCB1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc1Q8VCB1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Ndc1Q8VCB1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ndc1Q8VCB1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ndc1Q8VCB1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 Gm44428-201ENSMUST00000204474 874 ntBASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ndc1Q8VCB1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ndc1Q8VCB1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.05■□□□□ 0.96
Ndc1Q8VCB1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ndc1Q8VCB1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.04■□□□□ 0.96
Ndc1Q8VCB1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ndc1Q8VCB1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ndc1Q8VCB1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.03■□□□□ 0.96
Ndc1Q8VCB1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ndc1Q8VCB1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ndc1Q8VCB1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Ndc1Q8VCB1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Ndc1Q8VCB1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ndc1Q8VCB1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ndc1Q8VCB1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ndc1Q8VCB1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ndc1Q8VCB1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21■□□□□ 0.95
Ndc1Q8VCB1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms