Protein–RNA interactions for Protein: Q8QZS5

Rnf183, Probable E3 ubiquitin-protein ligase RNF183, mousemouse

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf183Q8QZS5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf183Q8QZS5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf183Q8QZS5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf183Q8QZS5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf183Q8QZS5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf183Q8QZS5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms