Protein–RNA interactions for Protein: Q8QZS5

Rnf183, Probable E3 ubiquitin-protein ligase RNF183, mousemouse

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf183Q8QZS5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf183Q8QZS5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf183Q8QZS5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf183Q8QZS5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf183Q8QZS5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf183Q8QZS5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf183Q8QZS5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf183Q8QZS5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf183Q8QZS5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf183Q8QZS5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf183Q8QZS5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf183Q8QZS5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf183Q8QZS5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf183Q8QZS5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf183Q8QZS5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf183Q8QZS5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf183Q8QZS5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf183Q8QZS5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf183Q8QZS5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf183Q8QZS5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf183Q8QZS5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms