Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap54Q8C6S9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Cfap54Q8C6S9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap54Q8C6S9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Cfap54Q8C6S9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cfap54Q8C6S9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cfap54Q8C6S9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cfap54Q8C6S9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cfap54Q8C6S9 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.19■■□□□ 1.14
Cfap54Q8C6S9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cfap54Q8C6S9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cfap54Q8C6S9 Serp2-204ENSMUST00000228055 705 ntBASIC22.18■■□□□ 1.14
Cfap54Q8C6S9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cfap54Q8C6S9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cfap54Q8C6S9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.16■■□□□ 1.14
Cfap54Q8C6S9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 Terc-201ENSMUST00000082862 423 ntBASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.15■■□□□ 1.14
Cfap54Q8C6S9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cfap54Q8C6S9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Cfap54Q8C6S9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cfap54Q8C6S9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.14■■□□□ 1.13
Cfap54Q8C6S9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.14■■□□□ 1.13
Cfap54Q8C6S9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cfap54Q8C6S9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cfap54Q8C6S9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cfap54Q8C6S9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cfap54Q8C6S9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cfap54Q8C6S9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cfap54Q8C6S9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cfap54Q8C6S9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cfap54Q8C6S9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cfap54Q8C6S9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Cfap54Q8C6S9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cfap54Q8C6S9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cfap54Q8C6S9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Gm44428-201ENSMUST00000204474 874 ntBASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.09■■□□□ 1.13
Cfap54Q8C6S9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cfap54Q8C6S9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Cfap54Q8C6S9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Cfap54Q8C6S9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Cfap54Q8C6S9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.08■■□□□ 1.12
Cfap54Q8C6S9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.07■■□□□ 1.12
Cfap54Q8C6S9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.07■■□□□ 1.12
Cfap54Q8C6S9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cfap54Q8C6S9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cfap54Q8C6S9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cfap54Q8C6S9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cfap54Q8C6S9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.05■■□□□ 1.12
Cfap54Q8C6S9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cfap54Q8C6S9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap54Q8C6S9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap54Q8C6S9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.03■■□□□ 1.12
Cfap54Q8C6S9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap54Q8C6S9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap54Q8C6S9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap54Q8C6S9 Etf1-202ENSMUST00000180351 108 ntBASIC22.02■■□□□ 1.12
Cfap54Q8C6S9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.02■■□□□ 1.11
Cfap54Q8C6S9 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.02■■□□□ 1.11
Cfap54Q8C6S9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cfap54Q8C6S9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap54Q8C6S9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Cfap54Q8C6S9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap54Q8C6S9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap54Q8C6S9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cfap54Q8C6S9 Gm42501-201ENSMUST00000200220 1026 ntBASIC22■■□□□ 1.11
Cfap54Q8C6S9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap54Q8C6S9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap54Q8C6S9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap54Q8C6S9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap54Q8C6S9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap54Q8C6S9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cfap54Q8C6S9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.96■■□□□ 1.11
Cfap54Q8C6S9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cfap54Q8C6S9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cfap54Q8C6S9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cfap54Q8C6S9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cfap54Q8C6S9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cfap54Q8C6S9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms