Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col6a6Q8C6K9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col6a6Q8C6K9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.64■□□□□ 0.89
Col6a6Q8C6K9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.63■□□□□ 0.89
Col6a6Q8C6K9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col6a6Q8C6K9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col6a6Q8C6K9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col6a6Q8C6K9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col6a6Q8C6K9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col6a6Q8C6K9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col6a6Q8C6K9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.61■□□□□ 0.89
Col6a6Q8C6K9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col6a6Q8C6K9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.6■□□□□ 0.89
Col6a6Q8C6K9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.6■□□□□ 0.89
Col6a6Q8C6K9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.6■□□□□ 0.89
Col6a6Q8C6K9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col6a6Q8C6K9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Col6a6Q8C6K9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Col6a6Q8C6K9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col6a6Q8C6K9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col6a6Q8C6K9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Col6a6Q8C6K9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col6a6Q8C6K9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.58■□□□□ 0.88
Col6a6Q8C6K9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col6a6Q8C6K9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col6a6Q8C6K9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col6a6Q8C6K9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col6a6Q8C6K9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.56■□□□□ 0.88
Col6a6Q8C6K9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.56■□□□□ 0.88
Col6a6Q8C6K9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Col6a6Q8C6K9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col6a6Q8C6K9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col6a6Q8C6K9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.55■□□□□ 0.88
Col6a6Q8C6K9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a6Q8C6K9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a6Q8C6K9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a6Q8C6K9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a6Q8C6K9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col6a6Q8C6K9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.53■□□□□ 0.88
Col6a6Q8C6K9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col6a6Q8C6K9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.52■□□□□ 0.88
Col6a6Q8C6K9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.51■□□□□ 0.87
Col6a6Q8C6K9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.5■□□□□ 0.87
Col6a6Q8C6K9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.5■□□□□ 0.87
Col6a6Q8C6K9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.5■□□□□ 0.87
Col6a6Q8C6K9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col6a6Q8C6K9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col6a6Q8C6K9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col6a6Q8C6K9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col6a6Q8C6K9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.49■□□□□ 0.87
Col6a6Q8C6K9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col6a6Q8C6K9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col6a6Q8C6K9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.47■□□□□ 0.87
Col6a6Q8C6K9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col6a6Q8C6K9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col6a6Q8C6K9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Col6a6Q8C6K9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col6a6Q8C6K9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col6a6Q8C6K9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.45■□□□□ 0.86
Col6a6Q8C6K9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col6a6Q8C6K9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col6a6Q8C6K9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col6a6Q8C6K9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col6a6Q8C6K9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.44■□□□□ 0.86
Col6a6Q8C6K9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col6a6Q8C6K9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col6a6Q8C6K9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a6Q8C6K9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col6a6Q8C6K9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms