Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28■■■□□ 2.07
Ptcd1Q8C2E4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Gm14117-201ENSMUST00000122417 843 ntBASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptcd1Q8C2E4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptcd1Q8C2E4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.97■■■□□ 2.07
Ptcd1Q8C2E4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
Ptcd1Q8C2E4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptcd1Q8C2E4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Ptcd1Q8C2E4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptcd1Q8C2E4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Ptcd1Q8C2E4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.96■■■□□ 2.07
Ptcd1Q8C2E4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptcd1Q8C2E4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Ptcd1Q8C2E4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ptcd1Q8C2E4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Ptcd1Q8C2E4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ptcd1Q8C2E4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ptcd1Q8C2E4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Ptcd1Q8C2E4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
Ptcd1Q8C2E4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptcd1Q8C2E4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptcd1Q8C2E4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptcd1Q8C2E4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptcd1Q8C2E4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptcd1Q8C2E4 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.93■■■□□ 2.06
Ptcd1Q8C2E4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.93■■■□□ 2.06
Ptcd1Q8C2E4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ptcd1Q8C2E4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptcd1Q8C2E4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptcd1Q8C2E4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.9■■■□□ 2.06
Ptcd1Q8C2E4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC27.9■■■□□ 2.06
Ptcd1Q8C2E4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ptcd1Q8C2E4 Gm45444-201ENSMUST00000211394 898 ntBASIC27.9■■■□□ 2.06
Ptcd1Q8C2E4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ptcd1Q8C2E4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptcd1Q8C2E4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptcd1Q8C2E4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptcd1Q8C2E4 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.89■■■□□ 2.06
Ptcd1Q8C2E4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.89■■■□□ 2.05
Ptcd1Q8C2E4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ptcd1Q8C2E4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.87■■■□□ 2.05
Ptcd1Q8C2E4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.86■■■□□ 2.05
Ptcd1Q8C2E4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ptcd1Q8C2E4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC27.86■■■□□ 2.05
Ptcd1Q8C2E4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Ptcd1Q8C2E4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ptcd1Q8C2E4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ptcd1Q8C2E4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Ptcd1Q8C2E4 Gm9959-201ENSMUST00000068277 390 ntBASIC27.83■■■□□ 2.05
Ptcd1Q8C2E4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ptcd1Q8C2E4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.83■■■□□ 2.05
Ptcd1Q8C2E4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.04
Ptcd1Q8C2E4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptcd1Q8C2E4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.82■■■□□ 2.04
Ptcd1Q8C2E4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptcd1Q8C2E4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ptcd1Q8C2E4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ptcd1Q8C2E4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.81■■■□□ 2.04
Ptcd1Q8C2E4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.8■■■□□ 2.04
Ptcd1Q8C2E4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ptcd1Q8C2E4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
Ptcd1Q8C2E4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ptcd1Q8C2E4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Ptcd1Q8C2E4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd1Q8C2E4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Ptcd1Q8C2E4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ptcd1Q8C2E4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.77■■■□□ 2.04
Ptcd1Q8C2E4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
Ptcd1Q8C2E4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.76■■■□□ 2.03
Ptcd1Q8C2E4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ptcd1Q8C2E4 Gm18755-201ENSMUST00000218030 1099 ntBASIC27.75■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms